Add plan-confirm steps to all workflows, cite alphaXiv and Agent Computer, add visuals to writer
- Every workflow prompt now shows a plan and asks the user to confirm before executing - /autoresearch asks for execution environment (local, branch, venv, cloud) and confirms before looping - Writer agent and key prompts now generate charts (pi-charts) and diagrams (Mermaid) when data calls for it - Cite alphaXiv and Agent Computer in README and website homepage - Clear terminal screen before launching Pi TUI - Remove Alpha Hub GitHub link in favor of alphaxiv.org Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
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@@ -7,6 +7,7 @@ topLevelCli: true
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Audit the paper and codebase for: $@
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Requirements:
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- Before starting, outline the audit plan: which paper, which repo, which claims to check. Present the plan to the user and confirm before proceeding.
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- Use the `researcher` subagent for evidence gathering and the `verifier` subagent to verify sources and add inline citations when the audit is non-trivial.
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- Compare claimed methods, defaults, metrics, and data handling against the actual code.
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- Call out missing code, mismatches, ambiguous defaults, and reproduction risks.
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