Refine research workflows and remove Agent Computer

extensions/research-tools/preview.ts

@@ -181,53 +181,3 @@ export async function pathExists(path: string): Promise<boolean> {
 		return false;
 	}
 }
-
-export function buildProjectAgentsTemplate(): string {
-	return `# Feynman Project Guide
-
-This file is read automatically at startup. It is the durable project memory for Feynman.
-
-## Project Overview
-- State the research question, target artifact, target venue, and key datasets or benchmarks here.
-
-## AI Research Context
-- Problem statement:
-- Core hypothesis:
-- Closest prior work:
-- Required baselines:
-- Required ablations:
-- Primary metrics:
-- Datasets / benchmarks:
-
-## Ground Rules
-- Do not modify raw data in \`Data/Raw/\` or equivalent raw-data folders.
-- Read first, act second: inspect project structure and existing notes before making changes.
-- Prefer durable artifacts in \`notes/\`, \`outputs/\`, \`experiments/\`, and \`papers/\`.
-- Keep strong claims source-grounded. Include direct URLs in final writeups.
-
-## Current Status
-- Replace this section with the latest project status, known issues, and next steps.
-
-## Session Logging
-- Use \`/log\` at the end of meaningful sessions to write a durable session note into \`notes/session-logs/\`.
-
-## Review Readiness
-- Known reviewer concerns:
-- Missing experiments:
-- Missing writing or framing work:
-`;
-}
-
-export function buildSessionLogsReadme(): string {
-	return `# Session Logs
-
-Use \`/log\` to write one durable note per meaningful Feynman session.
-
-Recommended contents:
-- what was done
-- strongest findings
-- artifacts written
-- unresolved questions
-- next steps
-`;
-}

extensions/research-tools/project-scaffold.ts

@@ -0,0 +1,64 @@
+export function buildProjectAgentsTemplate(): string {
+	return `# Feynman Project Guide
+
+This file is read automatically at startup. It is the durable project memory for Feynman.
+
+## Project Overview
+- State the research question, target artifact, target venue, and key datasets or benchmarks here.
+
+## AI Research Context
+- Problem statement:
+- Core hypothesis:
+- Closest prior work:
+- Required baselines:
+- Required ablations:
+- Primary metrics:
+- Datasets / benchmarks:
+
+## Ground Rules
+- Do not modify raw data in \`Data/Raw/\` or equivalent raw-data folders.
+- Read first, act second: inspect project structure and existing notes before making changes.
+- Prefer durable artifacts in \`notes/\`, \`outputs/\`, \`experiments/\`, and \`papers/\`.
+- Keep strong claims source-grounded. Include direct URLs in final writeups.
+
+## Current Status
+- Replace this section with the latest project status, known issues, and next steps.
+
+## Task Ledger
+- Track concrete tasks with IDs, owner, status, and output path.
+- Mark tasks as \`todo\`, \`in_progress\`, \`done\`, \`blocked\`, or \`superseded\`.
+- Do not silently merge or skip tasks; record the decision here.
+
+## Verification Gates
+- List the checks that must pass before delivery.
+- For each critical claim, figure, or metric, record how it will be verified and where the raw artifact lives.
+- Do not use words like \`verified\`, \`confirmed\`, or \`reproduced\` unless the underlying check actually ran.
+
+## Honesty Contract
+- Separate direct observations from inferences.
+- If something is uncertain, say so explicitly.
+- If a result looks cleaner than expected, assume it needs another check before it goes into the final artifact.
+
+## Session Logging
+- Use \`/log\` at the end of meaningful sessions to write a durable session note into \`notes/session-logs/\`.
+
+## Review Readiness
+- Known reviewer concerns:
+- Missing experiments:
+- Missing writing or framing work:
+`;
+}
+
+export function buildSessionLogsReadme(): string {
+	return `# Session Logs
+
+Use \`/log\` to write one durable note per meaningful Feynman session.
+
+Recommended contents:
+- what was done
+- strongest findings
+- artifacts written
+- unresolved questions
+- next steps
+`;
+}

extensions/research-tools/project.ts

@@ -5,7 +5,8 @@ import type { ExtensionAPI } from "@mariozechner/pi-coding-agent";
 import { Type } from "@sinclair/typebox";
 
 import { getExtensionCommandSpec } from "../../metadata/commands.mjs";
-import { renderHtmlPreview, renderPdfPreview, openWithDefaultApp, pathExists, buildProjectAgentsTemplate, buildSessionLogsReadme } from "./preview.js";
+import { renderHtmlPreview, renderPdfPreview, openWithDefaultApp, pathExists } from "./preview.js";
+import { buildProjectAgentsTemplate, buildSessionLogsReadme } from "./project-scaffold.js";
 import { formatToolText } from "./shared.js";
 import { searchSessionTranscripts } from "./session-search.js";