feat: Enable file editing and saving (#252)

## Summary
- Adds file writing capability to Monaco editor in the file viewer
- Implements writeFile API on the server for workspace files
- Integrates save functionality into the file viewer UI with proper
state management

## Bug Fixes (Review Feedback)
- Fixed failed save discarding edits when switching files - now checks
save result and only proceeds if successful
- Fixed refresh overwriting dirty editor state - now prompts for
confirmation before discarding edits
- Fixed save button unable to save empty files - changed check from `if
(content)` to `if (content !== undefined && content !== null)`
- Added agent edit conflict detection - when agent edits file while user
has unsaved changes, shows conflict dialog with Overwrite/Cancel options
- Fixed dialog appearing behind unpinned sidebar - increased alert
dialog z-index to z-100

## Related Issues
- Closes #251

---------

Co-authored-by: Jess Chadwick <jchadwick@gmail.com>

packages/ui/src/stores/alerts.ts

@@ -10,6 +10,8 @@ export type AlertDialogState = {
   variant?: AlertVariant
   confirmLabel?: string
   cancelLabel?: string
+  /** When false, prevents dismissal via Escape key or backdrop click. Default: true */
+  dismissible?: boolean
   onConfirm?: () => void
   onCancel?: () => void